Detail Information for IndEnz0002000908
IED ID IndEnz0002000908
Enzyme Type ID protease000908
Protein Name RNA2 polyprotein
Genome polyprotein M
M RNA polyprotein
Middle component RNA polyprotein
P2

Cleaved into: VP58; Movement protein
MP
; Large capsid protein
LCP
42k coat protein
Coat protein VP42
L subunit
Large coat protein
; Small capsid protein
SCP
22k coat protein
Coat protein VP22
S subunit
Gene Name
Organism Squash mosaic virus (strain melon) (SqMV)
Taxonomic Lineage Viruses Riboviria Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Comovirinae Comovirus Squash mosaic virus Squash mosaic virus (strain melon) (SqMV)
Enzyme Sequence MWHFCEQVYECFEGYHRDYSVQTVPVEYLASHYIVNKFRPDPLAVLWLFCLGIWWEIIQILHHLFQYKEPALFVGSCQNLAAFLEKKYSMEVIQKEGLAASALKDKERLTEKAVVNQPLSNLIPHSNKMYERSKSLLSGLKRGLIKQKEIAFDKLMGGSTIDFQHIPTGTLTPGENKVLDIPIVPQHLLTSTNITDYHQANKKNANGATALHVGAIEVIMDCFTSPDSNICGGMLLVDTAHLNPDNAIRSVFVAPFIGGRPIRVLLFPDTLVEIAPNMNSRFKLLCTTSNGDVAPDFNLAMVKVNVAGCAVSLTRTYTPTAYLEQELIKEKGAIVQYLNRHTFSMHRNNQMTKEEMQKQRLSFRLESALTLQEKHPLHATFCKSTNFVYKIGGDAKEGSNGNLTVNESQLSSHSPSAHVLHKHNNSGDNEVEFSEIGVVVPGAGRTKAYGQNELDLAQLSLDDTSSLRGTALQTKLATSRIILSKTMVGNTVLREDLLATFLQDSNERAAIDLIRTHVIRGKIRCVASINVPENTGCALAICFNSGITGAADTDIYTTSSQDAIVWNPACEKAVELTFNPNPCGDAWNFVFLQQTKAHFAVQCVTGWTTTPLTDLALVLTWHIDRSLCVPKTLTISSAHASFPINRWMGKLSFPQGPARVLKRMPLAIGGGAGTKDAILMNMPNAVISLHRYFRGDFVFEITKMSSPYIKATIAFFIAFGDITEEMTNLESFPHKLVQFAEIQGRTTITFTQSEFLTAWSTQVLSTVNPQKDGCPHLYALLHDSATSTIEGNFVIGVKLLDIRNYRAYGHNPGFEGARLLGISGQSTMVQQLGTYNPIWMVRTPLESTAQQNFASFTADLMESTISGDSTGNWNITVYPSPIANLLKVAAWKKGTIRFQLICRGAAVKQSDWAASARIDLINNLSNKALPARSWYITKPRGGDIEFDLEIAGPNNGFEMANSSWAFQTTWYLEIAIDNPKQFTLFELNACLMEDFEVAGNTLNPPILLS
Enzyme Length 1009
Uniprot Accession Number P36341
Absorption
Active Site
Activity Regulation
Binding Site
Calcium Binding
catalytic Activity
DNA Binding
EC Number
Enzyme Function FUNCTION: [VP58]: Responsible for viral RNA2 accumulation. May function by recruiting the RNA1-encoded polyprotein that contains the replication protein to RNA2 and enable its replication. {ECO:0000250|UniProtKB:P23009}.; FUNCTION: [Movement protein]: Transports the viral genome to neighboring plant cells directly through plasmosdesmata, without any budding. The movement protein allows efficient cell to cell propagation, by bypassing the host cell wall barrier. Acts by forming a tubular structure at the host plasmodesmata, enlarging it enough to allow free passage of virion capsids. Binds to GTP and to single-stranded RNA and single-stranded DNA in a non-sequence-specific manner. {ECO:0000250|UniProtKB:P03599}.; FUNCTION: [Large capsid protein]: Together with the small capsid protein, forms an icosahedral capsid (T=3) enclosing the viral positive strand RNA genome, with a diameter of approximately 300 Angstroms. The capsid is formed from 60 copies each of the large and the small capsid protein. The large capsid protein interacts with the viral RNA. {ECO:0000250|UniProtKB:P03599}.; FUNCTION: [Small capsid protein]: Together with the large capsid protein, forms an icosahedral capsid (T=3) enclosing the viral positive strand RNA genome, with a diameter of approximately 300 Angstroms. The capsid is formed from 60 copies each of the large and the small capsid protein. The small capsid protein forms the turrets at the fivefold axes of the viral particle. {ECO:0000250|UniProtKB:P03599}.
Temperature Dependency
PH Dependency
Pathway
nucleotide Binding
Features Chain (5); Natural variant (3); Region (1); Site (3)
Keywords Capsid protein;DNA-binding;Direct protein sequencing;GTP-binding;Host cell junction;Nucleotide-binding;RNA-binding;Suppressor of RNA silencing;T=3 icosahedral capsid protein;Transport;Viral movement protein;Virion
Interact With
Induction
Subcellular Location SUBCELLULAR LOCATION: [Movement protein]: Host cell junction, host plasmodesma {ECO:0000250|UniProtKB:P03599}. Note=Assembles in tubules that are embedded within modified plasmodesmata. {ECO:0000250|UniProtKB:P03599}.; SUBCELLULAR LOCATION: [Large capsid protein]: Virion {ECO:0000250|UniProtKB:P03599}.; SUBCELLULAR LOCATION: [Small capsid protein]: Virion {ECO:0000250|UniProtKB:P03599}.
Modified Residue
Post Translational Modification PTM: [RNA2 polyprotein]: Specific enzymatic cleavages by picornain 3C-like protease in vivo yield mature proteins. {ECO:0000305|PubMed:8503782}.
Signal Peptide
Structure 3D
Cross Reference PDB -
Mapped Pubmed ID -
Motif
Gene Encoded By
Mass 111,788
Kinetics
Metal Binding
Rhea ID
Cross Reference Brenda