| IED ID | IndEnz0002003942 |
| Enzyme Type ID | protease003942 |
| Protein Name |
Capsid protein Coat protein CP VP1 |
| Gene Name | ORF2 |
| Organism | San Miguel sea lion virus serotype 1 (SMSV-1) (SMSV serotype 1) |
| Taxonomic Lineage | Viruses Riboviria Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Caliciviridae Vesivirus Vesicular exanthema of swine virus (VESV) San Miguel sea lion virus serotype 1 (SMSV-1) (SMSV serotype 1) |
| Enzyme Sequence | MATTHTLLSFDDLEFLLHKKDLTDLYGERCGTLNLVINPYDLFLPDDLDDDWCDDPFNCCFSDVYTSIGTEYSYIDPPDLIYEEHCATNGHWPDGTPCEPILPPFVIEGTHHYYATKPGEAVSGILSKLGSAWDPDLQSTVDTKPDFVFRAESDGPGGADIVTEEQGTVVQQQPVPAQSALTTLAAASTGKTVDCEWTTFFSYHTAVNWSTTEAQGKILFSRALSPELNPYLRHISSLYSTWSGGIDVRFTVSGSGVFGGKLAALIVPPGIEPVESPTMLQYPHVLFDARQTEPVIFTIPDIRKTLYHSMDDTDTTRLVIMVYNELINPYEQSEPKSSCSITVETRPSSDFTFSLLKPPGSLLKHGSIPSDLIPRNSRHWMGNRWWSTIDGFVVQPRVFQSNRHFDFDSTTTGWSTPYYIPIEVTLEKLDRGGQYFKVTDTEKSLVPGLPDGWPDTTIPTAMTASNGNYDYTVAEYRITNNGTHFKGFYIMGNLTTKVKGSDNLGETQQTSRTLFASVGNYKDQNTINPTHKITSNSLVVYDANNVSAATAKTTTWHSTMSHLGYVLVDESPVGSDSTKVVRIATLPEAFTNGGNFPVFFTNKIQIGHFDRAHTKCFNSQVLMTSQKLAENHYTLPPDSLLVYRITDAASSWFDLGINHDGFSYVGISTIPELDFPLTFNLHGVQLAKVKLASKVKTSKTTI |
| Enzyme Length | 702 |
| Uniprot Accession Number | P36284 |
| Absorption | |
| Active Site | |
| Activity Regulation | |
| Binding Site | |
| Calcium Binding | |
| catalytic Activity | |
| DNA Binding | |
| EC Number | |
| Enzyme Function | FUNCTION: Capsid protein self assembles to form an icosahedral capsid with a T=3 symmetry, about 38 nm in diameter, and consisting of 180 capsid proteins. A smaller form of capsid with a diameter of 23 nm might be capsid proteins assembled as icosahedron with T=1 symmetry. The capsid encapsulate the genomic RNA and VP2 proteins. Attaches virion to target cells by binding to feline junctional adhesion molecule A (F11R) and/or to alpha-2,6-linked sialic acid. Once attached, the virion is endocytosed. Acidification of the endosome induces conformational change of capsid protein thereby injecting virus genomic RNA into host cytoplasm (By similarity). {ECO:0000250}. |
| Temperature Dependency | |
| PH Dependency | |
| Pathway | |
| nucleotide Binding | |
| Features | Chain (1); Propeptide (1); Site (1) |
| Keywords | Capsid protein;Host cytoplasm;T=3 icosahedral capsid protein;Virion |
| Interact With | |
| Induction | |
| Subcellular Location | SUBCELLULAR LOCATION: Virion. Host cytoplasm {ECO:0000250}. |
| Modified Residue | |
| Post Translational Modification | PTM: Cleaved by virus calcivirin to produce mature capsid protein. {ECO:0000250}. |
| Signal Peptide | |
| Structure 3D | |
| Cross Reference PDB | - |
| Mapped Pubmed ID | - |
| Motif | |
| Gene Encoded By | |
| Mass | 77,850 |
| Kinetics | |
| Metal Binding | |
| Rhea ID | |
| Cross Reference Brenda |