Detail Information for IndEnz0004000031
IED ID IndEnz0004000031
Enzyme Type ID xylanase000031
Protein Name DNA cross-link repair protein SNM1
AtSNM1
Gene Name SNM1 At3g26680 MLJ15.8
Organism Arabidopsis thaliana (Mouse-ear cress)
Taxonomic Lineage cellular organisms Eukaryota Viridiplantae Streptophyta Streptophytina Embryophyta Tracheophyta Euphyllophyta Spermatophyta Magnoliopsida Mesangiospermae eudicotyledons Gunneridae Pentapetalae rosids malvids Brassicales Brassicaceae Camelineae Arabidopsis Arabidopsis thaliana (Mouse-ear cress)
Enzyme Sequence MDFSDEDDDENCFGSRFNDGVNEEEEDEEGFVFNDDVEENEEEEGFASDFYKAGSDWSCLVEDEETVSSSVKKMKQSNLFQIWGLQENSPDTTKKMKQTDLFQSWGLQKPSPFTSPASNSAKKTTSALGKRRRDSSFSNDSPRPCPFYKKLPGTPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLLRLSLSVNPSSIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHTGDFRASKQMQTHPLLFNQRVHVLYLDTTYCNPRYKFPSKEDVLSYVVRITKDFLRKQPKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKATCLHVLPMSSLKVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQSCFREWLRR
Enzyme Length 484
Uniprot Accession Number Q38961
Absorption
Active Site
Activity Regulation
Binding Site
Calcium Binding
catalytic Activity
DNA Binding
EC Number
Enzyme Function FUNCTION: May be required for repair of DNA lesions formed after exposure to oxidative stress. {ECO:0000269|PubMed:15448639}.
Temperature Dependency
PH Dependency
Pathway
nucleotide Binding
Features Chain (1); Compositional bias (1); Region (2); Sequence conflict (1)
Keywords DNA damage;DNA repair;Nucleus;Reference proteome
Interact With
Induction INDUCTION: Induced by bleomycin, methyl methane sulphonate and hydrogen peroxide, which are known to induce oxidative lesions in DNA. Also induced by bacterial flagellin, which is known to elicit plant defense responses and a rapid oxidative burst, and by xylanase. {ECO:0000269|PubMed:15448639}.
Subcellular Location SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
Modified Residue
Post Translational Modification
Signal Peptide
Structure 3D
Cross Reference PDB -
Mapped Pubmed ID 18650403; 18775970; 21968679; 22442409;
Motif
Gene Encoded By
Mass 55,161
Kinetics
Metal Binding
Rhea ID
Cross Reference Brenda