Detailed Information for D01355

Basic information about inhibitors

IPAD-DB ID D01355
Name Methotrexate
Category Drugs
2D Structure
3D Structure
Molecular Formula C 2 0 H 2 2 N 8 O 5
Molecular Weight 454.4 g/mol
IUPAC Name (2S)-2-[[4-[(2,4-diaminopteridin-6-yl)methyl-methylamino]benzoyl]amino]pentanedioic acid
InChI InChI=1S/C20H22N8O5/c1-28(9-11-8-23-17-15(24-11)16(21)26-20(22)27-17)12-4-2-10(3-5-12)18(31)25-13(19(32)33)6-7-14(29)30/h2-5,8,13H,6-7,9H2,1H3,(H,25,31)(H,29,30)(H,32,33)(H4,21,22,23,26,27)/t13-/m0/s1
InChIKey FBOZXECLQNJBKD-ZDUSSCGKSA-N
Canonical SMILES CN(CC1=CN=C2C(=N1)C(=NC(=N2)N)N)C3=CC=C(C=C3)C(=O)NC(CCC(=O)O)C(=O)O
PubChem CID 126941
DrugBank Accession Number DB00563
CAS Registry Number 21672

Biological activity data

Ki
EC50
IC50
Inhibition
Toxicity
ROS(reactive oxygen species) -
Metal Chelating -
BBB(blood-brain barrier) -
Target Protein Aβ42
Effects
Research Models Molecular docking
Ref. Link

Physicochemical properties

Molecular Weight(Computed by SwissADME) 454.44
Hac(Computed by SwissADME) 33
Volume(Computed by ADMETlab 2.0) 431.731
Density(Computed by ADMETlab 2.0) 1.052
nRing(Computed by ADMETlab 2.0) 3
MaxRing(Computed by ADMETlab 2.0) 10
nHet(Computed by ADMETlab 2.0) 13
fChar(Computed by ADMETlab 2.0) 0
nRig(Computed by ADMETlab 2.0) 22
Flexibility(Computed by ADMETlab 2.0) 0.455
Stero Centers(Computed by ADMETlab 2.0) 1
LogS(Computed by ADMETlab 2.0) -3.477
LogD(Computed by ADMETlab 2.0) -0.507

ADMET properties

logP(Computed by ADMETlab 2.0) -2.747
TPSA(Computed by SwissADME) 210.54
Hbond Acceptor(Computed by SwissADME) 9
Hbond Donor(Computed by SwissADME) 5
Rotatable Bonds(Computed by SwissADME) 10

Pharmacokinetics

GI Absorption(Computed by SwissADME) Low
BBB(blood-brain barrier) Permeant(Computed by SwissADME) No
P-gp Substrate(Computed by SwissADME) No
CYP1A2 Inhibitor(Computed by SwissADME) No
CYP2C19 Inhibitor(Computed by SwissADME) No
CYP2C9 Inhibitor(Computed by SwissADME) No
CYP2D6 Inhibitor(Computed by SwissADME) No
CYP3A4 Inhibitor(Computed by SwissADME) No
log Kp(Skin Permeation)(Computed by SwissADME) -10.39

Druglikeness

Lipinski(Computed by SwissADME) 1
Ghose(Computed by SwissADME) 0
Veber(Computed by SwissADME) 1
Egan(Computed by SwissADME) 1
Muegge(Computed by SwissADME) 1
Bioavailability Score(Computed by SwissADME) 0.11