Detailed Information for D01358

Basic information about inhibitors

IPAD-DB ID D01358
Name Mithramycin A
Category Drugs
2D Structure
3D Structure
Molecular Formula C 5 2 H 7 6 O 2 4
Molecular Weight 1085.1 g/mol
IUPAC Name (2S,3S)-2-[(2S,4R,5R,6R)-4-[(2S,4R,5S,6R)-4-[(2S,4S,5R,6R)-4,5-dihydroxy-4,6-dimethyloxan-2-yl]oxy-5-hydroxy-6-methyloxan-2-yl]oxy-5-hydroxy-6-methyloxan-2-yl]oxy-3-[(1S,3S,4R)-3,4-dihydroxy-1-methoxy-2-oxopentyl]-6-[(2S,4R,5R,6R)-4-[(2S,4R,5S,6R)-4,5-dihydroxy-6-methyloxan-2-yl]oxy-5-hydroxy-6-methyloxan-2-yl]oxy-8,9-dihydroxy-7-methyl-3,4-dihydro-2H-anthracen-1-one
InChI InChI=1S/C52H76O24/c1-18-29(72-34-14-30(43(58)21(4)68-34)73-33-13-28(54)42(57)20(3)67-33)12-26-10-25-11-27(49(66-9)48(63)41(56)19(2)53)50(47(62)39(25)46(61)38(26)40(18)55)76-36-16-31(44(59)23(6)70-36)74-35-15-32(45(60)22(5)69-35)75-37-17-52(8,65)51(64)24(7)71-37/h10,12,19-24,27-28,30-37,41-45,49-51,53-61,64-65H,11,13-17H2,1-9H3/t19-,20-,21-,22-,23-,24-,27+,28-,30-,31-,32-,33+,34+,35+,36+,37+,41+,42-,43-,44-,45+,49+,50+,51-,52+/m1/s1
InChIKey CFCUWKMKBJTWLW-BKHRDMLASA-N
Canonical SMILES CC1C(C(CC(O1)OC2CC(OC(C2O)C)OC3=CC4=CC5=C(C(=O)C(C(C5)C(C(=O)C(C(C)O)O)OC)OC6CC(C(C(O6)C)O)OC7CC(C(C(O7)C)O)OC8CC(C(C(O8)C)O)(C)O)C(=C4C(=C3C)O)O)O)O
PubChem CID 163659
DrugBank Accession Number DB06810
CAS Registry Number 18378-89-7

Biological activity data

Ki
EC50
IC50
Inhibition
Toxicity
ROS(reactive oxygen species) -
Metal Chelating -
BBB(blood-brain barrier) -
Target Protein
Effects Significantly upregulate the synaptic plasticity gene expression and downregulated HDAC2 in SH-SY5Y cells overexpressing amyloid precursor protein
Research Models In SH-APP and CHME5 cell
Ref. Link

Physicochemical properties

Molecular Weight(Computed by SwissADME) 1085.15
Hac(Computed by SwissADME) 76
Volume(Computed by ADMETlab 2.0) 1032.006
Density(Computed by ADMETlab 2.0) 1.051
nRing(Computed by ADMETlab 2.0) 8
MaxRing(Computed by ADMETlab 2.0) 8
nHet(Computed by ADMETlab 2.0) 24
fChar(Computed by ADMETlab 2.0) 0
nRig(Computed by ADMETlab 2.0) 48
Flexibility(Computed by ADMETlab 2.0) 0.312
Stero Centers(Computed by ADMETlab 2.0) 25
LogS(Computed by ADMETlab 2.0) -1.502
LogD(Computed by ADMETlab 2.0) 0.933

ADMET properties

logP(Computed by ADMETlab 2.0) 0.601
TPSA(Computed by SwissADME) 358.2
Hbond Acceptor(Computed by SwissADME) 24
Hbond Donor(Computed by SwissADME) 11
Rotatable Bonds(Computed by SwissADME) 15

Pharmacokinetics

GI Absorption(Computed by SwissADME) Low
BBB(blood-brain barrier) Permeant(Computed by SwissADME) No
P-gp Substrate(Computed by SwissADME) Yes
CYP1A2 Inhibitor(Computed by SwissADME) No
CYP2C19 Inhibitor(Computed by SwissADME) No
CYP2C9 Inhibitor(Computed by SwissADME) No
CYP2D6 Inhibitor(Computed by SwissADME) No
CYP3A4 Inhibitor(Computed by SwissADME) No
log Kp(Skin Permeation)(Computed by SwissADME) -12.48

Druglikeness

Lipinski(Computed by SwissADME) 3
Ghose(Computed by SwissADME) 3
Veber(Computed by SwissADME) 2
Egan(Computed by SwissADME) 1
Muegge(Computed by SwissADME) 5
Bioavailability Score(Computed by SwissADME) 0.17