Detailed Information for C00248

Basic information about inhibitors

IPAD-DB ID C00248
Name Ginkgetin
Category Natural compounds
2D Structure
3D Structure
Molecular Formula C 3 2 H 2 2 O 1 0
Molecular Weight 566.5g/mol
IUPAC Name 5, 7-dihydroxy-8-[5-(5-hydroxy-7-methoxy-4-oxochromen-2-yl)-2-methoxyphenyl]-2-(4-hydroxyphenyl)chromen-4-one
InChI InChI=1S/C32H22O10/c1-39-18-10-20(34)30-23(37)13-27(41-28(30)11-18)16-5-8-25(40-2)19(9-16)29-21(35)12-22(36)31-24(38)14-26(42-32(29)31)15-3-6-17(33)7-4-15/h3-14, 33-36H, 1-2H3
InChIKey AIFCFBUSLAEIBR-UHFFFAOYSA-N
Canonical SMILES COC1=C(C=C(C=C1)C2=CC(=O)C3=C(C=C(C=C3O2)OC)O)C4=C(C=C(C5=C4OC(=CC5=O)C6=CC=C(C=C6)O)O)O
PubChem CID 5271805
DrugBank Accession Number -
CAS Registry Number 481-46-9

Biological activity data

Ki -
EC50 6.81 ± 4.08 μM(disassembling Aβ1–47 fibrillization)
IC50 4.92 ± 1.31 μM(Aβ1–42 fibrillization)
Inhibition -
Toxicity -
ROS(reactive oxygen species) -
Metal Chelating -
BBB(blood-brain barrier) -
Target Protein Aβ1-42 fibrillization
Effects -
Research Models -
Main Source -
Ref. Link

Physicochemical properties

Molecular Weight(Computed by SwissADME) 566.51
Hac(Computed by SwissADME) 42
Volume(Computed by ADMETlab 2.0) 556.408
Density(Computed by ADMETlab 2.0) 1.017
nRing(Computed by ADMETlab 2.0) 6
MaxRing(Computed by ADMETlab 2.0) 10
nHet(Computed by ADMETlab 2.0) 10
fChar(Computed by ADMETlab 2.0) 0
nRig(Computed by ADMETlab 2.0) 36
Flexibility(Computed by ADMETlab 2.0) 0.139
Stero Centers(Computed by ADMETlab 2.0) 0
LogS(Computed by ADMETlab 2.0) -4.563
LogD(Computed by ADMETlab 2.0) 2.501

ADMET properties

logP(Computed by ADMETlab 2.0) 5.74
TPSA(Computed by SwissADME) 159.80 Ų
Hbond Acceptor(Computed by SwissADME) 10
Hbond Donor(Computed by SwissADME) 4
Rotatable Bonds(Computed by SwissADME) 5

Pharmacokinetics

GI Absorption(Computed by SwissADME) Low
BBB(blood-brain barrier) Permeant(Computed by SwissADME) No
P-gp Substrate(Computed by SwissADME) No
CYP1A2 Inhibitor(Computed by SwissADME) No
CYP2C19 Inhibitor(Computed by SwissADME) No
CYP2C9 Inhibitor(Computed by SwissADME) Yes
CYP2D6 Inhibitor(Computed by SwissADME) No
CYP3A4 Inhibitor(Computed by SwissADME) No
log Kp(Skin Permeation)(Computed by SwissADME) -5.72 cm/s

Druglikeness

Lipinski(Computed by SwissADME) Yes, 1 violation: MW>500
Ghose(Computed by SwissADME) No, 3 violations: MW>480, WLOGP>5.6, MR>130
Veber(Computed by SwissADME) No, 1 violation: TPSA>140
Egan(Computed by SwissADME) No, 1 violation: TPSA>131.6
Muegge(Computed by SwissADME) No, 2 violations: XLOGP3>5, TPSA>150
Bioavailability Score(Computed by SwissADME) 0.55