Detailed Information for C00390

Basic information about inhibitors

IPAD-DB ID C00390
Name Lycoramine
Category Natural compounds
2D Structure
3D Structure
Molecular Formula C 1 7 H 2 3 N O 3
Molecular Weight 289.4g/mol
IUPAC Name (1R, 12S, 14S)-9-methoxy-4-methyl-11-oxa-4-azatetracyclo[8.6.1.01, 12.06, 17]heptadeca-6(17), 7, 9-trien-14-ol
InChI InChI=1S/C17H23NO3/c1-18-8-7-17-6-5-12(19)9-14(17)21-16-13(20-2)4-3-11(10-18)15(16)17/h3-4, 12, 14, 19H, 5-10H2, 1-2H3/t12-, 14-, 17-/m0/s1
InChIKey GJRMHIXYLGOZSE-JDFRZJQESA-N
Canonical SMILES CN1CCC23CCC(CC2OC4=C(C=CC(=C34)C1)OC)O
PubChem CID 443723
DrugBank Accession Number -
CAS Registry Number 21133-52-8

Biological activity data

Ki active-site 1DX6: 137.04 nM, active-site 1EVE: 136.70 nM,
EC50 -
IC50 -
Inhibition -
Toxicity -
ROS(reactive oxygen species) -
Metal Chelating -
BBB(blood-brain barrier) -
Target Protein Acetylcholinesterase (AChE)
Effects -
Research Models In Vitro, Molecular-docking
Main Source From Zephyranthes carinata
Ref. Link

Physicochemical properties

Molecular Weight(Computed by SwissADME) 289.37
Hac(Computed by SwissADME) 21
Volume(Computed by ADMETlab 2.0) 297.82
Density(Computed by ADMETlab 2.0) 0.971
nRing(Computed by ADMETlab 2.0) 4
MaxRing(Computed by ADMETlab 2.0) 16
nHet(Computed by ADMETlab 2.0) 4
fChar(Computed by ADMETlab 2.0) 0
nRig(Computed by ADMETlab 2.0) 20
Flexibility(Computed by ADMETlab 2.0) 0.05
Stero Centers(Computed by ADMETlab 2.0) 3
LogS(Computed by ADMETlab 2.0) -2.036
LogD(Computed by ADMETlab 2.0) 1.142

ADMET properties

logP(Computed by ADMETlab 2.0) 2.07
TPSA(Computed by SwissADME) 41.93 Ų
Hbond Acceptor(Computed by SwissADME) 4
Hbond Donor(Computed by SwissADME) 1
Rotatable Bonds(Computed by SwissADME) 1

Pharmacokinetics

GI Absorption(Computed by SwissADME) High
BBB(blood-brain barrier) Permeant(Computed by SwissADME) Yes
P-gp Substrate(Computed by SwissADME) Yes
CYP1A2 Inhibitor(Computed by SwissADME) No
CYP2C19 Inhibitor(Computed by SwissADME) No
CYP2C9 Inhibitor(Computed by SwissADME) No
CYP2D6 Inhibitor(Computed by SwissADME) Yes
CYP3A4 Inhibitor(Computed by SwissADME) No
log Kp(Skin Permeation)(Computed by SwissADME) -6.67 cm/s

Druglikeness

Lipinski(Computed by SwissADME) Yes, 0 violation
Ghose(Computed by SwissADME) Yes
Veber(Computed by SwissADME) Yes
Egan(Computed by SwissADME) Yes
Muegge(Computed by SwissADME) Yes
Bioavailability Score(Computed by SwissADME) 0.55