Detailed Information for C00530

Basic information about inhibitors

IPAD-DB ID C00530
Name Miyabenol C
Category Natural compounds
2D Structure
3D Structure
Molecular Formula C 4 2 H 3 2 O 9
Molecular Weight 680.7g/mol
IUPAC Name 5-[(2R, 3R)-6-hydroxy-4-[(2S, 3S)-6-hydroxy-2-(4-hydroxyphenyl)-4-[(E)-2-(4-hydroxyphenyl)ethenyl]-2, 3-dihydro-1-benzofuran-3-yl]-2-(4-hydroxyphenyl)-2, 3-dihydro-1-benzofuran-3-yl]benzene-1, 3-diol
InChI InChI=1S/C42H32O9/c43-27-9-2-22(3-10-27)1-4-25-15-32(48)20-35-37(25)40(42(50-35)24-7-13-29(45)14-8-24)34-19-33(49)21-36-39(34)38(26-16-30(46)18-31(47)17-26)41(51-36)23-5-11-28(44)12-6-23/h1-21, 38, 40-49H/b4-1+/t38-, 40+, 41+, 42-/m1/s1
InChIKey RKFYYCKIHVEWHX-YOBICRQBSA-N
Canonical SMILES C1=CC(=CC=C1C=CC2=C3C(C(OC3=CC(=C2)O)C4=CC=C(C=C4)O)C5=C6C(C(OC6=CC(=C5)O)C7=CC=C(C=C7)O)C8=CC(=CC(=C8)O)O)O
PubChem CID 6475924
DrugBank Accession Number -
CAS Registry Number 109605-83-6

Biological activity data

Ki -
EC50 -
IC50 -
Inhibition 15 ± 5%(Aβ fibril)
Toxicity -
ROS(reactive oxygen species) -
Metal Chelating -
BBB(blood-brain barrier) -
Target Protein
Effects -
Research Models -
Main Source -
Ref. Link

Physicochemical properties

Molecular Weight(Computed by SwissADME) 680.7
Hac(Computed by SwissADME) 51
Volume(Computed by ADMETlab 2.0) 695.555
Density(Computed by ADMETlab 2.0) 0.978
nRing(Computed by ADMETlab 2.0) 8
MaxRing(Computed by ADMETlab 2.0) 9
nHet(Computed by ADMETlab 2.0) 9
fChar(Computed by ADMETlab 2.0) 0
nRig(Computed by ADMETlab 2.0) 45
Flexibility(Computed by ADMETlab 2.0) 0.133
Stero Centers(Computed by ADMETlab 2.0) 4
LogS(Computed by ADMETlab 2.0) -2.924
LogD(Computed by ADMETlab 2.0) 4.104

ADMET properties

logP(Computed by ADMETlab 2.0) 8.33
TPSA(Computed by SwissADME) 160.07 Ų
Hbond Acceptor(Computed by SwissADME) 9
Hbond Donor(Computed by SwissADME) 7
Rotatable Bonds(Computed by SwissADME) 6

Pharmacokinetics

GI Absorption(Computed by SwissADME) Low
BBB(blood-brain barrier) Permeant(Computed by SwissADME) No
P-gp Substrate(Computed by SwissADME) No
CYP1A2 Inhibitor(Computed by SwissADME) No
CYP2C19 Inhibitor(Computed by SwissADME) No
CYP2C9 Inhibitor(Computed by SwissADME) No
CYP2D6 Inhibitor(Computed by SwissADME) No
CYP3A4 Inhibitor(Computed by SwissADME) No
log Kp(Skin Permeation)(Computed by SwissADME) -5.00 cm/s

Druglikeness

Lipinski(Computed by SwissADME) No, 2 violations: MW>500, NHorOH>5
Ghose(Computed by SwissADME) No, 4 violations: MW>480, WLOGP>5.6, MR>130, #atoms>70
Veber(Computed by SwissADME) No, 1 violation: TPSA>140
Egan(Computed by SwissADME) No, 2 violations: WLOGP>5.88, TPSA>131.6
Muegge(Computed by SwissADME) No, 5 violations: MW>600, XLOGP3>5, TPSA>150, #rings>7, H-don>5
Bioavailability Score(Computed by SwissADME) 0.17