Detailed Information for C00565

Basic information about inhibitors

IPAD-DB ID C00565
Name Garcinoic acid
Category Natural compounds
2D Structure
3D Structure
Molecular Formula C 2 7 H 3 8 O 4
Molecular Weight 426.6g/mol
IUPAC Name (2E, 6E, 10E)-13-[(2S)-6-hydroxy-2, 8-dimethyl-3, 4-dihydrochromen-2-yl]-2, 6, 10-trimethyltrideca-2, 6, 10-trienoic acid
InChI InChI=1S/C27H38O4/c1-19(11-7-13-21(3)26(29)30)9-6-10-20(2)12-8-15-27(5)16-14-23-18-24(28)17-22(4)25(23)31-27/h9, 12-13, 17-18, 28H, 6-8, 10-11, 14-16H2, 1-5H3, (H, 29, 30)/b19-9+, 20-12+, 21-13+/t27-/m0/s1
InChIKey QOFWRHWADNWKSU-XRBHEKJPSA-N
Canonical SMILES CC1=CC(=CC2=C1OC(CC2)(C)CCC=C(C)CCC=C(C)CCC=C(C)C(=O)O)O
PubChem CID 133556427
DrugBank Accession Number -
CAS Registry Number 91893-83-3

Biological activity data

Ki -
EC50 -
IC50 -
Inhibition -
Toxicity -
ROS(reactive oxygen species) -
Metal Chelating -
BBB(blood-brain barrier) -
Target Protein
Effects (1) Interfering with Aβ polymerization, (2)stimulating the ApoE and MDR1 detoxification system of mouse cortical astrocytes and the brain tissue, (3)reducing Aβ deposition in the brain of TgCRND8 mice, an animal model of AD,
Research Models TgCRND8 mice,  in mouse astrocytes
Main Source -
Ref. Link

Physicochemical properties

Molecular Weight(Computed by SwissADME) 426.59
Hac(Computed by SwissADME) 31
Volume(Computed by ADMETlab 2.0) 475.141
Density(Computed by ADMETlab 2.0) 0.897
nRing(Computed by ADMETlab 2.0) 2
MaxRing(Computed by ADMETlab 2.0) 10
nHet(Computed by ADMETlab 2.0) 4
fChar(Computed by ADMETlab 2.0) 0
nRig(Computed by ADMETlab 2.0) 15
Flexibility(Computed by ADMETlab 2.0) 0.667
Stero Centers(Computed by ADMETlab 2.0) 2
LogS(Computed by ADMETlab 2.0) -3.382
LogD(Computed by ADMETlab 2.0) 4.753

ADMET properties

logP(Computed by ADMETlab 2.0) 7.384
TPSA(Computed by SwissADME) 66.76
Hbond Acceptor(Computed by SwissADME) 4
Hbond Donor(Computed by SwissADME) 2
Rotatable Bonds(Computed by SwissADME) 10

Pharmacokinetics

GI Absorption(Computed by SwissADME) Low
BBB(blood-brain barrier) Permeant(Computed by SwissADME) No
P-gp Substrate(Computed by SwissADME) Yes
CYP1A2 Inhibitor(Computed by SwissADME) No
CYP2C19 Inhibitor(Computed by SwissADME) No
CYP2C9 Inhibitor(Computed by SwissADME) Yes
CYP2D6 Inhibitor(Computed by SwissADME) No
CYP3A4 Inhibitor(Computed by SwissADME) Yes
log Kp(Skin Permeation)(Computed by SwissADME) -3.74

Druglikeness

Lipinski(Computed by SwissADME) 1
Ghose(Computed by SwissADME) 1
Veber(Computed by SwissADME) 0
Egan(Computed by SwissADME) 1
Muegge(Computed by SwissADME) 1
Bioavailability Score(Computed by SwissADME) 0.85