Detailed Information for C00826

Basic information about inhibitors

IPAD-DB ID C00826
Name Ginsenoside Rg1
Category Natural compounds
2D Structure
3D Structure
Molecular Formula C 4 2 H 7 2 O 1 4
Molecular Weight 801.0 g/mol
IUPAC Name (2R, 3R, 4S, 5S, 6R)-2-[[(3S, 5R, 6S, 8R, 9R, 10R, 12R, 13R, 14R, 17S)-3, 12-dihydroxy-4, 4, 8, 10, 14-pentamethyl-17-[(2S)-6-methyl-2-[(2S, 3R, 4S, 5S, 6R)-3, 4, 5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyhept-5-en-2-yl]-2, 3, 5, 6, 7, 9, 11, 12, 13, 15, 16, 17-dodecahydro-1H-cyclopenta[a]phenanthren-6-yl]oxy]-6-(hydroxymethyl)oxane-3, 4, 5-triol
InChI InChI=1S/C42H72O14/c1-20(2)10-9-13-42(8, 56-37-34(52)32(50)30(48)25(19-44)55-37)21-11-15-40(6)28(21)22(45)16-26-39(5)14-12-27(46)38(3, 4)35(39)23(17-41(26, 40)7)53-36-33(51)31(49)29(47)24(18-43)54-36/h10, 21-37, 43-52H, 9, 11-19H2, 1-8H3/t21-, 22+, 23-, 24+, 25+, 26+, 27-, 28-, 29+, 30+, 31-, 32-, 33+, 34+, 35-, 36+, 37-, 39+, 40+, 41+, 42-/m0/s1
InChIKey YURJSTAIMNSZAE-HHNZYBFYSA-N
Canonical SMILES CC(=CCCC(C)(C1CCC2(C1C(CC3C2(CC(C4C3(CCC(C4(C)C)O)C)OC5C(C(C(C(O5)CO)O)O)O)C)O)C)OC6C(C(C(C(O6)CO)O)O)O)C
PubChem CID 441923
DrugBank Accession Number -
CAS Registry Number 22427-39-0

Biological activity data

Ki -
EC50 -
IC50 -
Inhibition -
Toxicity -
ROS(reactive oxygen species) -
Metal Chelating -
BBB(blood-brain barrier) -
Target Protein Aβ25-35
Effects Inhibit Aβ25-35-induced neuronal cell death by decreasing ROS accumulation, compromise Aβ-triggered NF-κB activation through its antioxidative effects
Research Models In cortical neurons
Main Source Ginseng
Ref. Link

Physicochemical properties

Molecular Weight(Computed by SwissADME) 801.01
Hac(Computed by SwissADME) 56
Volume(Computed by ADMETlab 2.0) 804.076
Density(Computed by ADMETlab 2.0) 0.996
nRing(Computed by ADMETlab 2.0) 6
MaxRing(Computed by ADMETlab 2.0) 17
nHet(Computed by ADMETlab 2.0) 14
fChar(Computed by ADMETlab 2.0) 0
nRig(Computed by ADMETlab 2.0) 33
Flexibility(Computed by ADMETlab 2.0) 0.303
Stero Centers(Computed by ADMETlab 2.0) 21
LogS(Computed by ADMETlab 2.0) -3.168
LogD(Computed by ADMETlab 2.0) 2.523

ADMET properties

logP(Computed by ADMETlab 2.0) 2.221
TPSA(Computed by SwissADME) 239.22
Hbond Acceptor(Computed by SwissADME) 14
Hbond Donor(Computed by SwissADME) 10
Rotatable Bonds(Computed by SwissADME)

Pharmacokinetics

GI Absorption(Computed by SwissADME) Low
BBB(blood-brain barrier) Permeant(Computed by SwissADME) No
P-gp Substrate(Computed by SwissADME) Yes
CYP1A2 Inhibitor(Computed by SwissADME) No
CYP2C19 Inhibitor(Computed by SwissADME) No
CYP2C9 Inhibitor(Computed by SwissADME) No
CYP2D6 Inhibitor(Computed by SwissADME) No
CYP3A4 Inhibitor(Computed by SwissADME) No
log Kp(Skin Permeation)(Computed by SwissADME) -9.29

Druglikeness

Lipinski(Computed by SwissADME) 3
Ghose(Computed by SwissADME) 3
Veber(Computed by SwissADME) 1
Egan(Computed by SwissADME) 1
Muegge(Computed by SwissADME) 4
Bioavailability Score(Computed by SwissADME) 0.17