Detailed Information for C00888

Basic information about inhibitors

IPAD-DB ID C00888
Name SilybinB
Category Natural compounds
2D Structure
3D Structure
Molecular Formula C 2 5 H 2 2 O 1 0
Molecular Weight 482.4 g/mol
IUPAC Name (2R, 3R)-3, 5, 7-trihydroxy-2-[(2S, 3S)-3-(4-hydroxy-3-methoxyphenyl)-2-(hydroxymethyl)-2, 3-dihydro-1, 4-benzodioxin-6-yl]-2, 3-dihydrochromen-4-one
InChI InChI=1S/C25H22O10/c1-32-17-6-11(2-4-14(17)28)24-20(10-26)33-16-5-3-12(7-18(16)34-24)25-23(31)22(30)21-15(29)8-13(27)9-19(21)35-25/h2-9, 20, 23-29, 31H, 10H2, 1H3/t20-, 23-, 24-, 25+/m0/s1
InChIKey SEBFKMXJBCUCAI-WAABAYLZSA-N
Canonical SMILES COC1=C(C=CC(=C1)C2C(OC3=C(O2)C=C(C=C3)C4C(C(=O)C5=C(C=C(C=C5O4)O)O)O)CO)O
PubChem CID 1548994
DrugBank Accession Number -
CAS Registry Number 65666-07-1

Biological activity data

Ki -
EC50 -
IC50 -
Inhibition -
Toxicity -
ROS(reactive oxygen species) -
Metal Chelating -
BBB(blood-brain barrier) -
Target Protein Aβ40 oligomers
Effects -
Research Models SH-SY5Y cells
Main Source -
Ref. Link

Physicochemical properties

Molecular Weight(Computed by SwissADME) 482.44
Hac(Computed by SwissADME) 35
Volume(Computed by ADMETlab 2.0) 459.711
Density(Computed by ADMETlab 2.0) 1.049
nRing(Computed by ADMETlab 2.0) 5
MaxRing(Computed by ADMETlab 2.0) 10
nHet(Computed by ADMETlab 2.0) 10
fChar(Computed by ADMETlab 2.0) 0
nRig(Computed by ADMETlab 2.0) 29
Flexibility(Computed by ADMETlab 2.0) 0.138
Stero Centers(Computed by ADMETlab 2.0) 4
LogS(Computed by ADMETlab 2.0) -4.792
LogD(Computed by ADMETlab 2.0) 2.524

ADMET properties

logP(Computed by ADMETlab 2.0)
TPSA(Computed by SwissADME) 155.14 Ų
Hbond Acceptor(Computed by SwissADME) 10
Hbond Donor(Computed by SwissADME) 5
Rotatable Bonds(Computed by SwissADME) 4

Pharmacokinetics

GI Absorption(Computed by SwissADME) Low
BBB(blood-brain barrier) Permeant(Computed by SwissADME) No
P-gp Substrate(Computed by SwissADME) No
CYP1A2 Inhibitor(Computed by SwissADME) No
CYP2C19 Inhibitor(Computed by SwissADME) No
CYP2C9 Inhibitor(Computed by SwissADME) No
CYP2D6 Inhibitor(Computed by SwissADME) No
CYP3A4 Inhibitor(Computed by SwissADME) Yes
log Kp(Skin Permeation)(Computed by SwissADME) -7.89 cm/s

Druglikeness

Lipinski(Computed by SwissADME) Yes, 0 violation
Ghose(Computed by SwissADME) No, 1 violation: MW>480
Veber(Computed by SwissADME) No, 1 violation: TPSA>140
Egan(Computed by SwissADME) No, 1 violation: TPSA>131.6
Muegge(Computed by SwissADME) No, 1 violation: TPSA>150
Bioavailability Score(Computed by SwissADME) 0.55