Detailed Information for C01267

Basic information about inhibitors

IPAD-DB ID C01267
Name Cyanidin-3-O-glucoside (Cy-3G)
Category Natural compounds
2D Structure
3D Structure
Molecular Formula C 2 1 H 2 1 O 1 1 +
Molecular Weight 449.4 g/mol
IUPAC Name (2S, 3R, 4S, 5S, 6R)-2-[2-(3, 4-dihydroxyphenyl)-5, 7-dihydroxychromenylium-3-yl]oxy-6-(hydroxymethyl)oxane-3, 4, 5-triol
InChI InChI=1S/C21H20O11/c22-7-16-17(27)18(28)19(29)21(32-16)31-15-6-10-12(25)4-9(23)5-14(10)30-20(15)8-1-2-11(24)13(26)3-8/h1-6, 16-19, 21-22, 27-29H, 7H2, (H3-, 23, 24, 25, 26)/p+1/t16-, 17-, 18+, 19-, 21-/m1/s1
InChIKey RKWHWFONKJEUEF-GQUPQBGVSA-O
Canonical SMILES C1=CC(=C(C=C1C2=[O+]C3=CC(=CC(=C3C=C2OC4C(C(C(C(O4)CO)O)O)O)O)O)O)O
PubChem CID 441667
DrugBank Accession Number -
CAS Registry Number 47705-70-4

Biological activity data

Ki -
EC50 -
IC50 -
Inhibition -
Toxicity -
ROS(reactive oxygen species) -
Metal Chelating -
BBB(blood-brain barrier) -
Target Protein β-site amyloid precursor protein cleaving enzyme 1 (BACE1)
Effects -
Research Models In vitro, Molecular docking, Molecular dynamics (MD) simulation
Main Source From Morus macroura fruit
Ref. Link

Physicochemical properties

Molecular Weight(Computed by SwissADME) 449.38
Hac(Computed by SwissADME) 32
Volume(Computed by ADMETlab 2.0) 414.465
Density(Computed by ADMETlab 2.0) 1.084
nRing(Computed by ADMETlab 2.0) 4
MaxRing(Computed by ADMETlab 2.0) 10
nHet(Computed by ADMETlab 2.0) 11
fChar(Computed by ADMETlab 2.0) 1
nRig(Computed by ADMETlab 2.0) 23
Flexibility(Computed by ADMETlab 2.0) 0.174
Stero Centers(Computed by ADMETlab 2.0) 5
LogS(Computed by ADMETlab 2.0) -3.544
LogD(Computed by ADMETlab 2.0) 1.163

ADMET properties

logP(Computed by ADMETlab 2.0) 0.007
TPSA(Computed by SwissADME) 193.44
Hbond Acceptor(Computed by SwissADME) 11
Hbond Donor(Computed by SwissADME) 8
Rotatable Bonds(Computed by SwissADME) 4

Pharmacokinetics

GI Absorption(Computed by SwissADME) Low
BBB(blood-brain barrier) Permeant(Computed by SwissADME) No
P-gp Substrate(Computed by SwissADME) No
CYP1A2 Inhibitor(Computed by SwissADME) No
CYP2C19 Inhibitor(Computed by SwissADME) No
CYP2C9 Inhibitor(Computed by SwissADME) No
CYP2D6 Inhibitor(Computed by SwissADME) No
CYP3A4 Inhibitor(Computed by SwissADME) No
log Kp(Skin Permeation)(Computed by SwissADME) -8.94

Druglikeness

Lipinski(Computed by SwissADME) 2
Ghose(Computed by SwissADME) 0
Veber(Computed by SwissADME) 1
Egan(Computed by SwissADME) 1
Muegge(Computed by SwissADME) 3
Bioavailability Score(Computed by SwissADME) 0.17